Integromics

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Integromics SL
Company typePrivate company
IndustryBiotechnology
Founded2002
FounderJose Maria Carazo, Alberto D. Pascual, Vicente Rodriguez
FateAcquired by PerkinElmer in 2017
Headquarters
Granada
,
Spain

Integromics was a global bioinformatics company headquartered in Granada, Spain and Madrid. The company had subsidiaries in the United States and United Kingdom, and distributors in 10 countries.[citation needed] Integromics specialised in bioinformatics software for data management and data analysis in genomics and proteomics. The company provided a line of products that serve gene expression, sequencing, and proteomics markets. Customers include genomic research centers, pharmaceutical companies, academic institutions, clinical research organizations, and biotechnology companies.[citation needed]

Integromics was acquired by PerkinElmer in 2017.[1]

History[edit]

Integromics was founded in 2002 as a spin-off of the National Center for Biotechnology (CNB / CSIC) in Spain and the University of Malaga. Principal founder Dr. Jose Maria Carazo was motivated by a market need to develop new computational methods for analyzing data, with the company's first product addressing the needs of the microarray data analysis market.

  • 2007 Integromics partners with Applied Biosystems
  • 2007 Integromics Inc. Establishes US Office at Philadelphia Science Center
  • 2008 Integromics partners with TIBCO Spotfire to develop Integromics Biomarker Discovery
  • 2009 Integromics partners with Ingenuity to offer integration for Comprehensive Genomics Analysis
  • 2009 Integromics forms part of the PROACTIVE consortium to develop a unique high throughput plasma biomarker research platform
  • 2009 Integromics releases its first proteomics product
  • 2009 Integromics received a venture investment of 1M€ from I + D Unifondo
  • 2010 Integromics and TATAA Biocenter collaborate to offer comprehensive qPCR data analysis
  • 2010 Integromics releases its first Next Generation Sequencing Analysis product
  • 2010 Integromics publication in Nature describes new class of gene-termini-associated human RNAs suggests a novel RNA copying mechanism, achieved using Integromics SeqSolve™ Next Generation Sequencing software[2][3][4]
  • 2011 Integromics and Ingenuity expand their co-operation with the integration of a fourth Integromics product to Ingenuity's IPA
  • 2011 Integromics launches OmicsHub Proteomics 2.0, a data management and analysis tool for mass spectrometry laboratories and core facilities
  • 2011 Integromics publication in Mol Cell Proteomics describes Multiplexed homogeneous proximity ligation assays for high-throughput protein biomarker research in serological material.[5]
  • 2011 Integromics publication in Cell describes novel polyadenylation genome-wide profiling, achieved using Integromics SeqSolve™ Next Generation Sequencing software[6]
  • 2012 Integromics partners with FPGMX to develop low-cost methods for clinical genomics[7]
  • 2012 Tibco Spotfire Certifies Integromics as its Sole Partner in the Fields of Genomics, Proteomics and Bioinformatics
  • 2012 Integromics Launches OmicsOffice Platform, a total solution[buzzword] that provides a streamlined and common analysis environment to analyse results from different genomics technologies and the analytical tools to compare and achieve a higher level of results using these combinations
  • 2013 Integromics partners with PerkinElmer for the Exclusive Worldwide Distributorship of New Omics Office Genomics Software from Integromics
  • 2013 Integromics partners with the Celgene Institute for Translational Research Europe (CITRE) and the Centre of Studies and Technical Research (CEIT) to implement the SANSCRIPT project
  • 2013 Integromics establishes a Key Collaboration with European HPC Experts to Develop New Big-data Computing Solutions[buzzword] for Genomics
  • 2017 Acquired by PerkinElmer

Partners[edit]

Integromics collaborated with international technology providers such as Applied Biosystems, Ingenuity, Spotfire, pharmaceutical companies, and academic institutions.[8][9][10][11][12]

  • RESOLVE. Resolve chronic inflammation and achieve healthy ageing by understanding non-regenerative repair[13][14]
  • LIPIDOMIC NET. Lipid droplets as dynamic organelles of fat deposition and release: translational research towards human disease. It is managed within the EU FP7, in close collaboration with LIPID MAPS[15] and Lipid Bank.[16][17][18]
  • PROACTIVE. High throughput proteomics systems for accelerated profiling of putative plasma biomarkers.[19][20]
  • ProteomeXchange. Coordination action to establish proteomics standards. Coordinated by the European Bioinformatics Institute[21][22]
  • IRIS. Integrated computational environment for high throughput RNA Interference Screening. Coordinated by Integromics.[23]

Awards and recognition[edit]

  • 2007 - Frost & Sullivan Product Innovation of the Year Award[24]
  • 2007 - Emprendedor XXI Innovation Award[25]
  • 2010 - Accésit of Premio Sello Innovación Award[citation needed]
  • 2011 - "Best Trajectory of a Technology-Based Innovative Enterprise (EIBT) 2011" Award[citation needed]
  • 2012 - Award of the Tech Media Europe 2012[26] & ICT Finance MarketPlace

Products and services[edit]

SeqSolve[edit]

SeqSolve is software for the tertiary analysis of Next Generation Sequencing (NGS) data.[27]

RealTime StatMiner[edit]

RealTime StatMiner is a Step-by-Step Guide for RT-qPCR data analysis. RealTime StatMiner is available as a standalone as well as a TIBCO Spotfire compatible application. Co-developed with Applied Biosystems.[28]

Integromics Biomarker Discovery[edit]

Integromics Biomarker Discovery (IBD) for microarray gene expression data analysis guides the user throughout a step-by-step workflow.[29]

OmicsHub Proteomics[edit]

OmicsHub® Proteomics is a platform for the central management and analysis of data in proteomics labs.[30]

See also[edit]

References[edit]

  1. ^ "Genestack offers 'missing link' for genomics drug discovery". Cambridge Network. Retrieved 2017-09-12.
  2. ^ Philipp Kapranov; Fatih Ozsolak; Sang Woo Kim; Sylvain Foissac; Doron Lipson; Chris Hart; Steve Roels; Christelle Borel; Stylianos E. Antonarakis; A. Paula Monaghan; Bino John; Patrice M. Milos (2010-07-29). "New class of gene-termini-associated human RNAs suggests a novel RNA copying mechanism". Nature. 466 (7306): 642–646. Bibcode:2010Natur.466..642K. doi:10.1038/nature09190. PMC 3058539. PMID 20671709.
  3. ^ "LifeScience: NextGen Sequencing publication by Spotfire partner Integromics - TIBCO Spotfire Community". Spotfire.tibco. Archived from the original on 2012-07-21. Retrieved 2012-07-26.
  4. ^ 6/2/2011 6:47:43 PM (2011-02-06). "Helicos and Integromics Identify New Class of Short RNA in Human Cells". Bio-IT World. Retrieved 2012-07-26.{{cite web}}: CS1 maint: numeric names: authors list (link)
  5. ^ "Multiplexed Homogeneous Proximity Ligation Assays for High-throughput Protein Biomarker Research in Serological Material". Mcponline. Retrieved 2012-07-26.
  6. ^ Ozsolak, Fatih; Kapranov, Philipp; Foissac, Sylvain; Kim, Sang Woo; Fishilevich, Elane; Monaghan, A. Paula; John, Bino; Milos, Patrice M. (2010-12-10). "Comprehensive Polyadenylation Site Maps in Yeast and Human Reveal Pervasive Alternative Polyadenylation". Cell. 143 (6): 1018–1029. doi:10.1016/j.cell.2010.11.020. PMC 3022516. PMID 21145465.
  7. ^ "Integromics partners with FPGMX to develop low-cost methods for clinical genomics — Integromics". Integromics. 2012-02-02. Archived from the original on 2013-01-26. Retrieved 2012-07-26.
  8. ^ "TIBCO Spotfire - Discover Spotfire". Spotfire.tibco.com. Archived from the original on 2012-03-11. Retrieved 2012-07-26.
  9. ^ "TIBCO Spotfire - News". Spotfire.tibco. Archived from the original on 2012-05-22. Retrieved 2012-07-26.
  10. ^ "TIBCO Spotfire - News". Spotfire.tibco. Archived from the original on 2012-05-22. Retrieved 2012-07-26.
  11. ^ "Ingenuity Systems". Ingenuity. 2009-06-02. Retrieved 2012-07-26.
  12. ^ "Press Release - Ingenuity Systems Chosen to be Sole Pathways Provider for Integromics in Andalusian Core Facility". Ingenuity. 2007-06-20. Retrieved 2012-07-26.
  13. ^ "European Commission : CORDIS : Projects 86774". cordis.europa.eu. Retrieved 2012-09-19.
  14. ^ "Eduardo González Couto". Resolve.punkt-international.eu. Retrieved 2012-07-26.
  15. ^ "LIPID MAPS Databases : LIPID MAPS Lipidomics Gateway". Lipidmaps. Retrieved 2012-07-26.
  16. ^ "LipidBank". Lipidbank.jp. 2007-06-19. Retrieved 2012-07-26.
  17. ^ "P21 Integromics SL - LipidomicsWiki". Lipidomicnet. Retrieved 2012-07-26.
  18. ^ "European Commission : CORDIS : Projects 88230". cordis.europa.eu. Retrieved 2012-09-19.
  19. ^ "Proactive - Start | Olink Bioscience". Olink. 2012-07-17. Archived from the original on 2016-02-03. Retrieved 2012-07-26.
  20. ^ [1][dead link]
  21. ^ "European Commission : CORDIS : Projects 100493". cordis.europa.eu. Retrieved 2012-09-19.
  22. ^ Short Name: ITG. "Integromics". proteomeXchange. Archived from the original on 2012-09-09. Retrieved 2012-07-26.
  23. ^ Cenix BioScience GmbH (2010-11-11). "News Releases | News & Archive | Cenix BioScience". Cenix. Retrieved 2012-07-26.
  24. ^ "Frost & Sullivan Honours Healthcare Leaders at 2008 Excellence in Healthcare Awards Banquet". Frost. 2008-02-22. Retrieved 2012-07-26.
  25. ^ "PREMIO EMPRENDEDORXXI 2009". Premio2009.emprendedorxxi.es. Archived from the original on 2012-06-26. Retrieved 2012-07-26.
  26. ^ "Tech Media Europe 2012". e-unlimited. 2012-02-03. Archived from the original on 2014-03-05. Retrieved 2014-03-05.
  27. ^ "SeqSolve™ - Next generation sequencing (NGS) — Integromics". Integromics. 2011-02-28. Archived from the original on 2012-04-27. Retrieved 2012-07-26.
  28. ^ "RealTime StatMiner® - PCR Analysis — Integromics". Integromics. 2011-02-25. Archived from the original on 2012-07-14. Retrieved 2012-07-26.
  29. ^ "Integromics Biomarker Discovery® - Microarray analysis — Integromics". Integromics. 2011-02-28. Archived from the original on 2012-07-14. Retrieved 2012-07-26.
  30. ^ "OmicsHub® - Proteomics data management — Integromics". Integromics. 2011-02-25. Archived from the original on 2012-07-14. Retrieved 2012-07-26.
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